momps¶
Purpose¶
This component performs Multi-Locus Sequence Typing (MLST) on Legionella pneumophila from reads and assemblies.
Note
Software page: https://github.com/bioinfo-core-BGU/mompS
Input/Output type¶
- Input type:
fasta
- Output type: None
Note
The default input parameter for fasta data is --fasta
. This process
also requires FastQ reads provided via the --fastq
parameter.
Parameters¶
None.
Published results¶
results/typing/momps
: Stores TSV files with the ST and allelic profiles for each strain.
Published reports¶
None.
Default directives¶
momps
:container
: flowcraft/mompsversion
: 0.1.0-4