flowcraft.templates.mashscreen2json module¶
Purpose¶
This module is intended to generate a json output for mash screen results that can be imported in pATLAS.
Expected input¶
The following variables are expected whether using NextFlow or the
main()
executor.
mash_output
: String with the name of the mash screen output file.- e.g.:
'sortedMashScreenResults_SampleA.txt'
- e.g.: